STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03744.1KEGG: gfo:GFO_0234 hypothetical protein; SPTR: Putative uncharacterized protein. (179 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
       0.739
EHQ03743.1
PFAM: Biopterin-dependent aromatic amino acid hydroxylase; COGs: COG3186 Phenylalanine-4-hydroxylase; InterPro IPR019774; KEGG: gfo:GFO_0233 phenylalanine 4-monooxygenase; PFAM: Aromatic amino acid hydroxylase, C-terminal; SPTR: Phenylalanine 4-monooxygenase.
 
     0.578
EHQ03945.1
KEGG: gfo:GFO_1011 membrane protein; SPTR: Membrane protein.
  
     0.566
EHQ03054.1
Hypothetical protein; PFAM: Retroviral aspartyl protease; KEGG: gfo:GFO_3081 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.563
EHQ03746.1
PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance; COGs: COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance; InterPro IPR007298; KEGG: svo:SVI_3540 lipoprotein; PFAM: Copper resistance lipoprotein NlpE; SPTR: Lipoprotein.
       0.496
EHQ04408.1
Protein involved in gliding motility GldI; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; TIGRFAM: peptidyl-prolyl isomerase, gliding motility-associated; InterPro IPR019869:IPR001179; KEGG: gfo:GFO_0787 gliding motility protein GldI; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; TIGRFAM: Gliding motility-associated, peptidyl-prolyl isomerase, GldI.
  
     0.491
EHQ01647.1
KEGG: zpr:ZPR_1176 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.488
EHQ01948.1
KEGG: gfo:GFO_0627 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.461
EHQ03079.1
KEGG: gfo:GFO_0107 membrane protein; SPTR: Membrane protein.
  
     0.456
EHQ03302.1
KEGG: zpr:ZPR_3774 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.444
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.