STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03785.1PFAM: Peptidase family M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: zpr:ZPR_3057 membrane or aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Membrane or secreted aminopeptidase. (546 aa)    
Predicted Functional Partners:
EHQ03786.1
PFAM: Carboxyl transferase domain; COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022; KEGG: gfo:GFO_2300 acyl-CoA carboxylase carboxyl transferase subunit beta; PFAM: Carboxyl transferase; SPTR: Acyl-CoA carboxylase carboxyl transferase subunit beta.
  
  
 0.730
EHQ02542.1
PFAM: Protein of unknown function (DUF2480); InterPro IPR018914; KEGG: zpr:ZPR_0207 hypothetical protein; PFAM: Protein of unknown function DUF2480; SPTR: Putative uncharacterized protein.
  
     0.620
EHQ03395.1
KEGG: lan:Lacal_0486 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.521
EHQ03764.1
PFAM: Peptidase family M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: zpr:ZPR_1204 aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Secreted aminopeptidase.
  
  
 
0.517
EHQ03977.1
Rhodanese-like protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: fte:Fluta_3008 Rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese-like protein.
  
 
 0.479
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.452
EHQ03787.1
KEGG: gfo:GFO_2299 membrane protein; SPTR: Membrane protein.
       0.422
EHQ03788.1
Hypothetical protein; PFAM: DinB family; KEGG: gfo:GFO_2298 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.422
EHQ03784.1
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
       0.417
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.