STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutIImidazolonepropionase; PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; HAMAP: Imidazolonepropionase; InterPro IPR005920:IPR006680; KEGG: gfo:GFO_0758 imidazolonepropionase; PFAM: Amidohydrolase 1; SPTR: Imidazolonepropionase; TIGRFAM: Imidazolonepropionase. (412 aa)    
Predicted Functional Partners:
EHQ03805.1
Arginase/agmatinase/formiminoglutamase; PFAM: Arginase family; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035; KEGG: gfo:GFO_0757 formimidoylglutamase; PFAM: Ureohydrolase; SPTR: Formimidoylglutamase; Belongs to the arginase family.
 
 
 0.993
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.992
EHQ01124.1
PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; COGs: COG2986 Histidine ammonia-lyase; InterPro IPR005921:IPR001106; KEGG: gfo:GFO_1500 histidine ammonia-lyase-1; PFAM: Phenylalanine/histidine ammonia-lyase; SPTR: Histidine ammonia-lyase; TIGRFAM: Histidine ammonia-lyase.
 
  
 0.907
EHQ03902.1
PFAM: Phenylalanine and histidine ammonia-lyase; COGs: COG2986 Histidine ammonia-lyase; InterPro IPR001106; KEGG: gfo:GFO_1668 histidine ammonia-lyase-2; PFAM: Phenylalanine/histidine ammonia-lyase; SPTR: Histidine ammonia-lyase-2.
 
  
 0.904
EHQ03360.1
Arginase/agmatinase/formiminoglutamase; PFAM: Arginase family; InterPro IPR006035; KEGG: gfo:GFO_3016 hypothetical protein; PFAM: Ureohydrolase; SPTR: Putative uncharacterized protein; Belongs to the arginase family.
   
 
 0.871
EHQ03747.1
KEGG: gfo:GFO_0236 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
 
 0.669
EHQ03804.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: zpr:ZPR_1648 GNAT family acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GNAT family acetyltransferase.
       0.663
EHQ03807.1
PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterPro IPR013154:IPR013149; KEGG: gfo:GFO_0760 zinc-type alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; SPTR: Zinc-type alcohol dehydrogenase.
       0.403
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.