Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03812.1KEGG: gfo:GFO_1016 hypothetical protein; SPTR: Putative uncharacterized protein. (106 aa)    
Predicted Functional Partners:
EHQ03813.1
PFAM: Histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: gfo:GFO_1015 histidine kinase domain-containing protein; PFAM: Signal transduction histidine kinase, internal region; SPTR: Membrane protein containing an internal histidine kinase domain.
 
    
0.805
EHQ03814.1
KEGG: zpr:ZPR_2428 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.786
EHQ03811.1
Two component transcriptional regulator, LytTR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_14118 two-component system response regulator; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator.
  
  0.750
EHQ01647.1
KEGG: zpr:ZPR_1176 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.600
EHQ03638.1
KEGG: zpr:ZPR_3044 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.568
EHQ04287.1
KEGG: zpr:ZPR_2357 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.548
EHQ01465.1
Two component transcriptional regulator, LytTR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: mtt:Ftrac_0265 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family.
  
  0.533
EHQ03815.1
Transposase IS4 family protein; PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: shg:Sph21_4622 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein.
       0.533
EHQ02754.1
KEGG: gfo:GFO_3281 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.531
EHQ01455.1
KEGG: gfo:GFO_2067 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.519
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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