Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03816.1PFAM: TonB-dependent Receptor Plug Domain; InterPro IPR012910; KEGG: fjo:Fjoh_4916 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor, plug. (719 aa)    
Predicted Functional Partners:
EHQ03814.1
KEGG: zpr:ZPR_2428 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.813
EHQ03817.1
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; PFAM: Pyridoxamine 5'-phosphate oxidase; InterPro IPR011576; KEGG: kdi:Krodi_0696 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein.
       0.512
EHQ02300.1
KEGG: lby:Lbys_1875 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
 
   0.441
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.