STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03863.1PFAM: Putative modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR006311:IPR002510; KEGG: gfo:GFO_1941 DNA gyrase modulator family protein; PFAM: Peptidase U62, modulator of DNA gyrase; SPTR: DNA gyrase modulator family protein. (546 aa)    
Predicted Functional Partners:
EHQ03864.1
PFAM: Putative modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: gfo:GFO_1940 DNA gyrase modulator family protein; PFAM: Peptidase U62, modulator of DNA gyrase; SPTR: DNA gyrase modulator family protein.
 
     0.928
EHQ03869.1
KEGG: gfo:GFO_1935 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.794
EHQ03870.1
KEGG: gfo:GFO_1934 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.792
EHQ03865.1
KEGG: kdi:Krodi_1998 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.782
EHQ03868.1
Double-transmembrane region domain protein; PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain; InterPro IPR011933:IPR011445; KEGG: gfo:GFO_1936 hypothetical protein; SPTR: Membrane protein containing DUF1550; TIGRFAM: Double-transmembrane region, N-terminal.
 
     0.781
EHQ03867.1
PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: gfo:GFO_1937 hypothetical protein; PFAM: Protein of unknown function DUF58; SPTR: Putative uncharacterized protein.
 
     0.760
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.