STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03903.1Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: zpr:ZPR_2775 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-[acyl-carrier-protein] reductase. (245 aa)    
Predicted Functional Partners:
EHQ03907.1
PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030:IPR014031; KEGG: zpr:ZPR_2771 3-oxoacyl-[acyl-carrier-protein] synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  0.995
EHQ03911.1
3-oxoacyl-(ACP) synthase III; PFAM: Beta-ketoacyl synthase, N-terminal domain; KEGG: zpr:ZPR_2767 3-oxoacyl-(ACP) synthase III; SPTR: 3-oxoacyl-(ACP) synthase III.
 
  0.990
EHQ03910.1
PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030:IPR014031; KEGG: zpr:ZPR_2768 3-oxoacyl-[acyl-carrier-protein] synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 0.989
EHQ03914.1
PFAM: FabA-like domain; KEGG: zpr:ZPR_2764 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; SPTR: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase.
 
  0.981
EHQ03905.1
KEGG: gfo:GFO_1665 FabZ-like protein; SPTR: FabZ-like protein.
 
  
  0.978
EHQ01914.1
PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR004410:IPR014043; KEGG: zpr:ZPR_3677 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; SPTR: Malonyl CoA-acyl carrier protein transacylase; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase.
 0.976
EHQ03908.1
KEGG: zpr:ZPR_2770 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  0.961
EHQ03904.1
PFAM: Bacterial lipid A biosynthesis acyltransferase; COGs: COG4261 acyltransferase; InterPro IPR004960; KEGG: gfo:GFO_1666 lipid A biosynthesis acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; SPTR: Lipid A biosynthesis acyltransferase.
 
     0.933
EHQ03913.1
PFAM: Outer membrane lipoprotein carrier protein LolA; InterPro IPR004564; KEGG: gfo:GFO_1657 LolA-like outer-membrane lipoprotein carrier protein; PFAM: Outer membrane lipoprotein carrier protein LolA; SPTR: LolA-like outer-membrane lipoprotein carrier protein.
 
    0.929
EHQ02643.1
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.925
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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