STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03990.1Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG3127 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component; InterPro IPR003838; KEGG: gfo:GFO_1950 FtsX family membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: FtsX family membrane protein (Predicted permease). (851 aa)    
Predicted Functional Partners:
EHQ03991.1
PFAM: ABC transporter; COGs: COG4181 ABC-type transport system involved in lysophospholipase L1 biosynthesis ATPase component; InterPro IPR003593:IPR003439; KEGG: gfo:GFO_1949 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein.
 
 
 0.969
EHQ03992.1
Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: gfo:GFO_1948 GDSL-like lipase/acylhydrolase; PFAM: Lipase, GDSL; SPTR: GDSL-like lipase/acylhydrolase.
 
     0.901
EHQ03172.1
Protein of unknown function DUF214; PFAM: Predicted permease; TIGRFAM: Acidobacterial duplicated orphan permease; InterPro IPR003838; KEGG: gfo:GFO_0715 FtsX family membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: FtsX family membrane protein (Predicted permease).
 
 
  0.504
EHQ03166.1
Protein of unknown function DUF214; PFAM: Predicted permease; InterPro IPR003838; KEGG: zpr:ZPR_4636 transporter permease protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative transporter permease protein.
 
 
  0.501
EHQ03162.1
PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: gfo:GFO_0709 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein.
 
 
 0.492
EHQ03175.1
PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: gfo:GFO_0716 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein.
 
 
 0.484
EHQ03168.1
Protein of unknown function DUF214; PFAM: Predicted permease; InterPro IPR003838; KEGG: gfo:GFO_0714 FtsX family membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: FtsX family membrane protein (Predicted permease).
 
 
  0.478
EHQ03321.1
PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: zpr:ZPR_0603 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein.
  
 
 0.400
macB
ABC transporter related protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.400
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.400
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.