STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ04069.1PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: zpr:ZPR_2449 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent outer membrane receptor. (1032 aa)    
Predicted Functional Partners:
EHQ04070.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: zpr:ZPR_2448 SusD/RagB family protein; PFAM: RagB/SusD; SPTR: SusD/RagB family protein.
     0.942
EHQ02245.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: zpr:ZPR_0682 outer hypothetical protein, probably involved in nutrient binding; PFAM: RagB/SusD; SPTR: Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.785
EHQ04072.1
ASPIC/UnbV domain protein; PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013517:IPR011519; KEGG: gfo:GFO_1031 FG-GAP repeat-containing protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: Secreted protein containing FG-GAP repeats.
  
     0.735
EHQ04073.1
PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013517; KEGG: cao:Celal_0984 fg-gap repeat protein; PFAM: FG-GAP; SPTR: Putative uncharacterized protein.
  
     0.708
EHQ02129.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: zpr:ZPR_4094 SusD/RagB family protein; PFAM: RagB/SusD; SPTR: SusD/RagB family protein.
 
 
   0.684
EHQ01355.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_3391 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein.
 
   0.679
EHQ03199.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: zpr:ZPR_1628 RagB/SusD family protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein.
 
 
   0.664
EHQ03190.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: rmr:Rmar_2081 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein, probably involved in nutrient binding.
 
   0.649
EHQ01800.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: cao:Celal_1797 ragb/susd domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain-containing protein.
 
 
   0.643
EHQ02896.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: fbc:FB2170_09221 putative outer membrane protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.605
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.