STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ04082.1Peptidase; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; WD40-like Beta Propeller Repeat; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659:IPR001375; KEGG: srm:SRM_02249 peptidase; SPTR: Peptidase, S9A/B/C family. (671 aa)    
Predicted Functional Partners:
EHQ01625.1
Competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR001453:IPR008136:IPR008135; KEGG: fbc:FB2170_15946 putative competence-damage inducible; PFAM: CinA, C-terminal; Molybdopterin binding; SPTR: CinA-like protein; TIGRFAM: Competence-induced protein CinA; Ci [...]
  
 
  0.738
EHQ04083.1
PFAM: Dienelactone hydrolase family; COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: rmr:Rmar_2600 carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase; SPTR: Carboxymethylenebutenolidase.
    
  0.720
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
    
  0.703
EHQ01166.1
PFAM: PA domain; Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fbc:FB2170_12986 putative glutamate carboxypeptidase II; PFAM: Peptidase M28; SPTR: Putative Glutamate carboxypeptidase II.
  
    0.587
EHQ02488.1
Peptidase S41; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.566
EHQ04084.1
PFAM: Peptidase family M28; Fibronectin type III domain; COGs: COG2234 aminopeptidase; InterPro IPR007484:IPR003961; KEGG: gfo:GFO_1039 fibronectin type III repeat-containing secreted peptidase, family M28; PFAM: Peptidase M28; Fibronectin, type III; SPTR: Fibronectin type III repeat domain containing secreted peptidase, family M28.
 
    0.537
EHQ03781.1
PFAM: Metallopeptidase family M24; KEGG: kdi:Krodi_0291 M24 family peptidase; SPTR: M24 family peptidase.
  
     0.523
EHQ01494.1
PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: rbi:RB2501_11657 hypothetical protein; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A; SPTR: Secreted protein containing N-Zinc-dependent carboxypeptidase related domain protein.
  
     0.522
EHQ01553.1
PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_00200 FmtA-like protein; PFAM: Beta-lactamase-related; SPTR: FmtA-like protein.
 
     0.498
EHQ01493.1
PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: sli:Slin_3381 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase.
  
     0.431
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.