STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ04109.1KEGG: gfo:GFO_1067 hypothetical protein; SPTR: Putative uncharacterized protein. (100 aa)    
Predicted Functional Partners:
EHQ01910.1
KEGG: zpr:ZPR_3673 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.807
EHQ04298.1
KEGG: gfo:GFO_1792 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
EHQ02462.1
KEGG: gfo:GFO_3049 secreted protein; SPTR: Secreted protein.
  
     0.772
EHQ04148.1
KEGG: gfo:GFO_1451 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
EHQ02754.1
KEGG: gfo:GFO_3281 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.767
EHQ02800.1
AAA-4 family protein; PFAM: Divergent AAA domain; InterPro IPR007421; KEGG: gfo:GFO_3407 hypothetical protein; PFAM: ATPase associated with various cellular activities, AAA-4; SPTR: Putative uncharacterized protein.
  
     0.767
EHQ02174.1
Membrane protein involved in aromatic hydrocarbon degradation; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); InterPro IPR005017; KEGG: zpr:ZPR_3783 outer membrane transport protein; PFAM: Membrane protein, aromatic hydrocarbon degradation; SPTR: Outer membrane transport protein.
  
     0.765
EHQ03957.1
KEGG: cat:CA2559_08806 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.765
EHQ03079.1
KEGG: gfo:GFO_0107 membrane protein; SPTR: Membrane protein.
  
     0.764
EHQ01108.1
KEGG: cat:CA2559_10443 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.762
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.