STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ04121.1PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: gfo:GFO_1080 secreted beta-lactamase family protein; PFAM: Beta-lactamase-related; SPTR: Putative uncharacterized protein. (382 aa)    
Predicted Functional Partners:
EHQ04118.1
Bile acid:sodium symporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: gfo:GFO_1077 hypothetical protein; PFAM: Bile acid:sodium symporter; SPTR: Putative uncharacterized protein.
       0.773
EHQ04119.1
PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: zpr:ZPR_2053 acyl-CoA thioester hydrolase; PFAM: Thioesterase superfamily; SPTR: Acyl-CoA thioester hydrolase.
       0.773
EHQ04120.1
KEGG: zpr:ZPR_2054 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
EHQ04122.1
RmuC-domain protein; PFAM: RmuC family; COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: gfo:GFO_1081 DNA recombination protein RmuC; PFAM: RmuC; SPTR: DNA recombination protein RmuC.
       0.773
EHQ04009.1
PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: mtt:Ftrac_2237 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase family enzyme.
  
     0.692
EHQ04123.1
PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: gfo:GFO_1082 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein; manually curated.
       0.550
EHQ04124.1
ABC-type transporter, integral membrane subunit; PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: gfo:GFO_1083 ABC-type transporter permease protein; PFAM: Bacterial transport system permease protein; SPTR: ABC-type transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.550
EHQ04125.1
PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: cat:CA2559_12513 periplasmic-binding protein of ABC transporter; PFAM: Periplasmic binding protein; SPTR: Periplasmic-binding protein of ABC transporter.
       0.550
EHQ01962.1
PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: gfo:GFO_2541 secreted amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Secreted amidohydrolase.
  
     0.522
EHQ03769.1
Hypothetical protein; PFAM: DsrE/DsrF-like family; InterPro IPR014865; KEGG: kdi:Krodi_2218 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.502
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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