STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX66763.1KEGG: cat:CA2559_03200 hypothetical protein; SPTR: Putative uncharacterized protein. (896 aa)    
Predicted Functional Partners:
ADX67238.1
UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: fjo:Fjoh_0699 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: Putative helicase; PFAM: UvrD/REP helicase.
 
   
 0.868
ADX66925.1
Protein of unknown function DUF349; InterPro IPR007139; KEGG: zpr:ZPR_1665 hypothetical protein; PFAM: Protein of unknown function DUF349; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF349).
  
     0.709
ADX67277.1
KEGG: gfo:GFO_3593 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.631
ADX68500.1
KEGG: gfo:GFO_1650 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Conserved hypothetical protein 95.
 
     0.630
ADX66764.1
COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: fjo:Fjoh_4575 sodium:dicarboxylate symporter; PFAM: Sodium:dicarboxylate symporter; SPTR: DAACS family dicarboxylate/amino acid:sodium (Na+) or proton (H+) symporter; PFAM: Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.623
ADX68150.1
Protein of unknown function DUF177; InterPro IPR003772; KEGG: zpr:ZPR_4624 hypothetical protein; PFAM: Protein of unknown function DUF177; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1399.
  
     0.611
ADX66765.1
methylmalonyl-CoA epimerase; InterPro IPR017515:IPR004360; KEGG: cat:CA2559_03285 lactoylglutathione lyase and related lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Methylmalonyl-CoA epimerase; TIGRFAM: Methylmalonyl-CoA epimerase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase.
       0.610
ADX66766.1
Hypothetical protein; SPTR: Lipocalin.
       0.610
ADX67473.1
KEGG: coc:Coch_1461 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.596
ADX67371.1
Peptidoglycan-binding lysin domain protein; InterPro IPR018392:IPR001828:IPR002482; KEGG: fba:FIC_02310 LysM-repeat protein; PFAM: Peptidoglycan-binding lysin domain; Extracellular ligand-binding receptor; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: LysM-repeat protein; PFAM: Receptor family ligand binding region; LysM domain.
  
     0.595
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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