STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX66822.1Glycoside hydrolase family 24; COGs: COG3772 Phage-related lysozyme (muraminidase); InterPro IPR002196; KEGG: mar:MAE_60270 lysozyme; PFAM: Glycoside hydrolase, family 24; SPTR: Lysozyme; PFAM: Phage lysozyme. (153 aa)    
Predicted Functional Partners:
ADX66833.1
KEGG: coc:Coch_0642 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.805
ADX66826.1
KEGG: coc:Coch_0635 hypothetical protein; SPTR: Putative uncharacterized protein.
     
 0.792
ADX66823.1
KEGG: fbc:FB2170_01901 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADX66824.1
KEGG: ang:An04g01830 hypothetical protein; SPTR: Contig An04c0100, complete genome.
       0.768
ADX66825.1
KEGG: coc:Coch_0634 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.768
ADX66827.1
KEGG: coc:Coch_0636 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.768
ADX66828.1
KEGG: coc:Coch_0637 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.768
ADX66829.1
KEGG: coc:Coch_0638 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.768
ADX66830.1
KEGG: nve:NEMVE_v1g136840 hypothetical protein; SPTR: Conserved domain protein.
       0.768
ADX66831.1
KEGG: dds:Ddes_1075 cysteine desulfurase NifS; SPTR: Cysteine desulfurase NifS.
       0.768
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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