STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX66935.1Gliding motility-associated lipoprotein GldJ; InterPro IPR019865:IPR005532; KEGG: fba:FIC_00569 GldJ; PFAM: Sulphatase-modifying factor; SPTR: Gliding motility-associated lipoprotein GldJ; TIGRFAM: Gliding motility-associated lipoprotein GldJ; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldJ. (546 aa)    
Predicted Functional Partners:
murF
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/ D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
      0.933
ADX67267.1
Gliding motility associated protein GldN; InterPro IPR019847; KEGG: fba:FIC_00491 GldN; SPTR: GldN; TIGRFAM: Gliding motility associated protein GldN; TIGRFAM: gliding motility associated protien GldN.
 
   
 0.906
ADX67269.1
Gliding motility-associated protein GldL; InterPro IPR019852; KEGG: fba:FIC_00489 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility-associated protein, GldL; TIGRFAM: gliding motility-associated protein GldL.
 
   
 0.903
ADX67870.1
KEGG: fba:FIC_00461 GldD; SPTR: Gliding motility-associated lipoprotein GldD; TIGRFAM: gliding motility-associated lipoprotein GldD.
  
   
 0.902
ADX67268.1
KEGG: fba:FIC_00490 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM.
 
   
 0.882
ADX66937.1
KEGG: fba:FIC_00567 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.876
ADX68185.1
Gliding-associated putative ABC transporter substrate-binding component GldG; COGs: COG3225 ABC-type uncharacterized transport system involved in gliding motility auxiliary component; InterPro IPR019196:IPR019863; KEGG: fba:FIC_00811 gliding motility protein GldG; PFAM: ABC-type uncharacterised transport system; SPTR: Gliding motility protein GldG; TIGRFAM: Gliding-associated putative ABC transporter substrate-binding GldG; PFAM: ABC-type uncharacterized transport system; TIGRFAM: gliding-associated putative ABC transporter substrate-binding component GldG.
  
   
 0.871
ADX67536.1
KEGG: fba:FIC_00396 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.862
ADX67992.1
Gliding motility protein, GldB; KEGG: fba:FIC_01789 GldB; SPTR: Putative uncharacterized protein.
  
   
 0.860
ADX68443.1
KEGG: fba:FIC_00009 TPR domain protein; SPTR: TPR domain protein.
  
   
 0.852
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.