STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX66946.1KEGG: zpr:ZPR_0294 transcriptional regulator; SPTR: Transcriptional regulator. (172 aa)    
Predicted Functional Partners:
ADX66947.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fba:FIC_02403 multidrug resistance protein, AcrA/AcrE family; PFAM: Secretion protein HlyD; SPTR: Multidrug resistance protein, AcrA/AcrE family; TIGRFAM: Secretion protein HlyD; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.940
ADX66949.1
RND efflux system, outer membrane lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: zpr:ZPR_0291 OprM-like outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Putative outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
     0.930
ADX66948.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: zpr:ZPR_0292 AcrB/AcrD/AcrF family membrane transporter; PFAM: Acriflavin resistance protein; SPTR: HAE1 efflux family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.904
ADX67192.1
KEGG: fba:FIC_01827 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.625
ADX67715.1
KEGG: rbi:RB2501_14699 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.569
ADX67196.1
KEGG: zpr:ZPR_3020 protein containing PKD domain; SPTR: Protein containing PKD domain.
  
     0.541
ADX66945.1
YceI family protein; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: fba:FIC_00651 YceI like family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; SPTR: YceI like family protein; PFAM: YceI-like domain; Belongs to the UPF0312 family.
       0.533
ADX66944.1
YceI family protein; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: dfe:Dfer_4627 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; SPTR: YceI family protein; PFAM: YceI-like domain; Belongs to the UPF0312 family.
       0.523
ADX67127.1
KEGG: fba:FIC_02507 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.454
ADX67489.1
KEGG: chu:CHU_2666 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.430
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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