STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX66987.1KEGG: ccu:Ccur_02830 ParB-like nuclease; SPTR: Putative uncharacterized protein. (278 aa)    
Predicted Functional Partners:
ADX67243.1
KEGG: gfo:GFO_2847 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.649
ADX68537.1
KEGG: zpr:ZPR_0252 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.649
ADX68772.1
Cobyrinic acid ac-diamide synthase; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: fbc:FB2170_09631 SpoOJ regulator protein; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: SpoOJ regulator protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.649
rsmG
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.644
ADX66988.1
KEGG: cqu:CpipJ_CPIJ016726 hypothetical protein; SPTR: Novel protein similar to glutamate receptor interacting protein 1 (GRIP1).
       0.603
ADX66989.1
InterPro IPR002941; KEGG: bpo:BP951000_1480 DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6; SPTR: DNA (Cytosine-5-)-methyltransferase; PFAM: DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
  
 0.482
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.405
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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