STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX67005.1KEGG: fjo:Fjoh_3698 hypothetical protein; SPTR: Hypothetical lipoprotein. (167 aa)    
Predicted Functional Partners:
ADX67006.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: tmt:Tmath_1837 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative helix-turn-helix protein; PFAM: Helix-turn-helix.
       0.773
ADX67004.1
Hypothetical protein; KEGG: pfh:PFHG_00761 conserved hypothetical protein; SPTR: Putative uncharacterized protein.
       0.757
ADX67003.1
Peptidase S24/S26A/S26B, conserved region; InterPro IPR019759; KEGG: coc:Coch_0868 putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Putative phage repressor.
       0.683
ADX67002.1
KEGG: tsi:TSIB_0619 predicted DNA/RNA repair helicase; SPTR: Predicted DNA/RNA repair helicase.
       0.484
ADX67000.1
KEGG: dal:Dalk_0367 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.454
ADX67001.1
Hypothetical protein; KEGG: ant:Arnit_1673 porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase.
       0.454
ADX66998.1
YqaJ recombinase family protein; InterPro IPR019080; KEGG: bhe:BH06850 exonuclease; PFAM: YqaJ viral recombinase family; SPTR: Exonuclease; PFAM: YqaJ-like viral recombinase domain.
       0.448
ADX66999.1
Hypothetical protein; KEGG: paa:Paes_2207 alkaline phosphatase; SPTR: Autotransporter adhesin.
       0.448
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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