STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX67084.1KEGG: fjo:Fjoh_5008 hypothetical protein; SPTR: Putative uncharacterized protein. (317 aa)    
Predicted Functional Partners:
ADX67086.1
KEGG: cat:CA2559_06660 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.953
ADX67085.1
COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852; KEGG: fps:FP0579 cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: Possible cytochrome-c peroxidase; PFAM: Cytochrome c; Di-haem cytochrome c peroxidase.
 
     0.946
ADX67089.1
KEGG: zpr:ZPR_1576 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.669
ADX67088.1
YHS domain-containing protein; InterPro IPR007029:IPR011017; KEGG: chu:CHU_0524 hypothetical protein; PFAM: YHS; SMART: TRASH; SPTR: Heavy metal translocating P-type ATPase; PFAM: YHS domain.
 
     0.646
ADX68031.1
KEGG: zpr:ZPR_4162 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.604
ADX67087.1
COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: gfo:GFO_0193 electron transport protein; PFAM: Copper chaperone SCO1/SenC; SPTR: SCO1/SenC family protein; PFAM: SCO1/SenC.
       0.541
ADX66880.1
Protein of unknown function, Porph ging; InterPro IPR019115; KEGG: phe:Phep_2585 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200.
  
     0.503
ADX67083.1
RNA methyltransferase, TrmA family; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR002792:IPR010280:IPR001566; KEGG: fjo:Fjoh_2500 RNA methyltransferase; PFAM: (Uracil-5)-methyltransferase; Deoxyribonuclease/rho motif-related TRAM; SPTR: RNA methyltransferase, TrmA family; TIGRFAM: 23S rRNA methyltransferase/RumA; PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.494
ADX67080.1
Hypothetical protein; KEGG: tet:TTHERM_00312830 cation channel family protein; SPTR: Putative uncharacterized protein.
       0.487
ADX67081.1
KEGG: fba:FIC_01970 conserved hypothetical protein, secreted; SPTR: Putative uncharacterized protein.
       0.487
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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