STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepTPeptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. (411 aa)    
Predicted Functional Partners:
ADX67101.1
Hydroxymethylglutaryl-CoA lyase; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: fjo:Fjoh_2213 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase; PRIAM: Hydroxymethylglutaryl-CoA lyase; SPTR: Hydroxymethylglutaryl-CoA lyase like protein; PFAM: HMGL-like.
  
    0.598
ADX67103.1
KEGG: fba:FIC_01800 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2807).
       0.508
ADX67100.1
COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: fba:FIC_00458 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain.
     
 0.430
ADX68281.1
Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR007865:IPR000994; KEGG: fjo:Fjoh_0688 peptidase M24; PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; SPTR: Xaa-Pro aminopeptidase; manually curated; PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24.
  
 
 0.403
ADX68575.1
Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: pdi:BDI_2283 putative aminopeptidase; PFAM: Peptidase M24, structural domain; Creatinase; SPTR: Putative aminopeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain.
  
 
 0.403
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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