STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX67121.1Protein of unknown function DUF1508; COGs: COG3422 conserved hypothetical protein; InterPro IPR010879; KEGG: nmu:Nmul_A2168 hypothetical protein; PFAM: Domain of unknown function DUF1508; SPTR: Conserved domain protein; PFAM: Domain of unknown function (DUF1508). (109 aa)    
Predicted Functional Partners:
ADX67013.1
COGs: COG1652 Uncharacterized protein containing LysM domain; InterPro IPR002482:IPR007055:IPR018392; KEGG: spe:Spro_2836 LysM domain/BON superfamily protein; PFAM: Peptidoglycan-binding lysin domain; Transport-associated; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Peptidoglycan-binding LysM; PFAM: Putative phospholipid-binding domain; LysM domain.
  
   0.955
ADX66833.1
KEGG: coc:Coch_0642 hypothetical protein; SPTR: Putative uncharacterized protein.
   
   0.648
ADX67307.1
InterPro IPR007341; KEGG: cko:CKO_01818 hypothetical protein; PFAM: Transglycosylase-associated protein; SPTR: Putative integral membrane protein; PFAM: Transglycosylase associated protein.
   
  
 0.552
ADX66754.1
Fructosamine/Ketosamine-3-kinase; COGs: COG3001 conserved hypothetical protein; InterPro IPR016477; KEGG: cpi:Cpin_5338 fructosamine kinase; PFAM: Fructosamine/Ketosamine-3-kinase; SPTR: Fructosamine kinase; PFAM: Fructosamine kinase.
   
    0.491
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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