STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX67241.1RagB/SusD domain-containing protein; InterPro IPR012944; KEGG: fba:FIC_02313 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein, probably involved in nutrient binding; PFAM: SusD family. (481 aa)    
Predicted Functional Partners:
ADX67242.1
TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: fba:FIC_02314 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein probably involved in nutrient binding; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
     0.942
ADX67901.1
TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: fba:FIC_02314 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein probably involved in nutrient binding; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
 
 
 0.849
ADX67244.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: zpr:ZPR_3880 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent outer membrane receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
 
   0.747
ADX67243.1
KEGG: gfo:GFO_2847 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 
 0.729
ADX68632.1
TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: phe:Phep_1362 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug domain protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
 
   0.723
ADX68633.1
InterPro IPR012944; KEGG: phe:Phep_1361 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; PFAM: SusD family.
  
     0.696
ADX67809.1
TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: fba:FIC_02316 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
     0.652
ADX66788.1
InterPro IPR005094; KEGG: fjo:Fjoh_3713 relaxase/mobilization nuclease family protein; PFAM: Endonuclease relaxase, MobA/VirD2; SPTR: Relaxase/mobilization nuclease family protein; PFAM: Relaxase/Mobilisation nuclease domain.
  
    0.582
ADX66794.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: coc:Coch_0145 integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Integrase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.571
ADX67055.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: fjo:Fjoh_2098 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; SPTR: Possible TonB-dependent receptor.
  
 
   0.555
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.