STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX67259.1COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: cat:CA2559_07585 glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase, family 2; SPTR: B-glycosyltransferase, glycosyltransferase family 2 protein; PFAM: Glycosyl transferase family 2. (353 aa)    
Predicted Functional Partners:
recR
Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.801
ADX67812.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.666
ADX68651.1
InterPro IPR001173; KEGG: fjo:Fjoh_2519 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Probable beta-1,4-glucosyltransferase; PFAM: Glycosyl transferase family 2.
 
    0.653
ADX67896.1
KEGG: fba:FIC_00720 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.631
ADX66902.1
KEGG: cat:CA2559_12378 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.617
ADX67313.1
Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702; KEGG: fba:FIC_00192 tyrosine-protein kinase wzc; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Tyrosine-protein kinase involved in exopolysaccharide biosynthesis; TIGRFAM: Exopolysaccharide synthesis protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.597
ADX67261.1
COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: fba:FIC_01686 sodium/iodide co-transporter; PFAM: Sodium/solute symporter; SPTR: Sodium/iodide co-transporter; manually curated; PFAM: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.578
ADX66936.1
KEGG: fba:FIC_00568 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.546
ADX67813.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.520
ADX67942.1
KEGG: fba:FIC_01285 low affinity penicillin binding protein; SPTR: Putative uncharacterized protein.
  
     0.504
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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