STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX67478.1OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: fjo:Fjoh_0831 OmpA/MotB domain-containing protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA/MotB domain protein; PFAM: OmpA family. (297 aa)    
Predicted Functional Partners:
ADX67477.1
Exodeoxyribonuclease III Xth; COGs: COG0708 Exonuclease III; InterPro IPR005135:IPR000097:IPR004808; KEGG: coc:Coch_1451 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SPTR: Exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth).
       0.790
ADX66747.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: coc:Coch_1888 membrane-bound proton-translocating pyrophosphatase; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: V-type H(+)-translocating pyrophosphatase; PFAM: OmpA family.
  
 
 0.783
ADX66936.1
KEGG: fba:FIC_00568 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.694
ADX67479.1
GCN5-related N-acetyltransferase; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: fba:FIC_01242 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.
       0.623
ADX66871.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: pfs:PFLU2242 hypothetical protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Possible outer membrane protein OmpA; PFAM: OmpA family.
  
 
0.509
ADX67476.1
KEGG: cel:C54D10.4 hypothetical protein.
       0.497
ADX67716.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR008816:IPR006665; KEGG: fjo:Fjoh_0258 OmpA/MotB domain-containing protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Rickettsia 17kDa surface antigen; SPTR: OmpA family protein; PFAM: OmpA family.
  
 
0.496
ADX67302.1
COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: bpi:BPLAN_439 preprotein translocase subunit YajC; PFAM: Preprotein translocase YajC; SPTR: Preprotein translocase; TIGRFAM: Preprotein translocase YajC; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit.
  
 
 
 0.446
ADX68280.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR002035:IPR003367:IPR006665; KEGG: sat:SYN_02036 von Willebrand factor type A domain-containing protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; von Willebrand factor, type A; Thrombospondin, type 3-like repeat; SMART: von Willebrand factor, type A; SPTR: Von Willebrand factor, type A; PFAM: von Willebrand factor type A domain; OmpA family.
 
 
 0.424
ADX67945.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR003367:IPR006665; KEGG: fba:FIC_02057 OmpA; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Thrombospondin, type 3-like repeat; SPTR: Outer membrane protein A; PFAM: OmpA family; Thrombospondin type 3 repeat.
  
 
 0.414
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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