STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX67539.1KEGG: fba:FIC_00142 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: FixH. (148 aa)    
Predicted Functional Partners:
ADX67543.1
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883:IPR003468:IPR004677; KEGG: fba:FIC_00146 cytochrome c oxidase subunit CcoN; PFAM: Cytochrome c oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome c oxidase; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome c oxidase, monohaem subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; Belongs [...]
 
 
 0.999
ADX67540.1
Cytochrome c oxidase accessory protein CcoG; COGs: COG0348 Polyferredoxin; InterPro IPR014116; KEGG: fba:FIC_00143 type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation; SPTR: Cytochrome c oxidase accessory protein CcoG; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG.
 
  
 0.953
ADX67541.1
InterPro IPR003088; KEGG: fba:FIC_00144 cytochrome c oxidase subunit CcoP; PFAM: Cytochrome c, class I; SPTR: Cytochrome c oxidase; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III.
 
 
 0.932
ADX67538.1
Integral membrane protein; COGs: COG2836 conserved hypothetical protein; KEGG: fba:FIC_00141 heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis CycZ-like domain, possible membrane copper tolerance protein; SPTR: Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein.
 
     0.930
ADX67545.1
COGs: COG2217 Cation transport ATPase; InterPro IPR008250:IPR005834; KEGG: fba:FIC_00148 type cbb3 cytochrome oxidase biogenesis protein CcoI; copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: P-ATPase superfamily P-type ATPase copper transporter; PFAM: E1-E2 ATPase; Putative metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC.
 
   
 0.818
ADX67542.1
KEGG: fba:FIC_00145 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cbb3-type cytochrome oxidase component FixQ.
  
  
 0.765
ADX68439.1
InterPro IPR003088; KEGG: fba:FIC_02414 hypothetical protein; PFAM: Cytochrome c, class I; SPTR: Cytochrome c family protein; PFAM: Cytochrome c.
 
 
 0.640
ADX67544.1
InterPro IPR004714; KEGG: fps:FP1154 cytochrome cbb3 oxidase maturation protein CcoS; SPTR: Putative uncharacterized protein; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type.
  
  
 0.638
ADX68514.1
KEGG: zpr:ZPR_0790 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.585
ADX67159.1
COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541:IPR017562; KEGG: fba:FIC_00930 putative cytochrome c-type biogenesis protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c biogenesis protein; TIGRFAM: Cytochrome c-type biogenesis protein CcsA; PFAM: Cytochrome C assembly protein; ResB-like family; TIGRFAM: cytochrome c-type biogenesis protein CcsB.
  
     0.579
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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