STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX67545.1COGs: COG2217 Cation transport ATPase; InterPro IPR008250:IPR005834; KEGG: fba:FIC_00148 type cbb3 cytochrome oxidase biogenesis protein CcoI; copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: P-ATPase superfamily P-type ATPase copper transporter; PFAM: E1-E2 ATPase; Putative metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC. (793 aa)    
Predicted Functional Partners:
ADX67543.1
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883:IPR003468:IPR004677; KEGG: fba:FIC_00146 cytochrome c oxidase subunit CcoN; PFAM: Cytochrome c oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome c oxidase; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome c oxidase, monohaem subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; Belongs [...]
 
   
 0.946
ADX67541.1
InterPro IPR003088; KEGG: fba:FIC_00144 cytochrome c oxidase subunit CcoP; PFAM: Cytochrome c, class I; SPTR: Cytochrome c oxidase; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III.
 
   
 0.907
ADX67540.1
Cytochrome c oxidase accessory protein CcoG; COGs: COG0348 Polyferredoxin; InterPro IPR014116; KEGG: fba:FIC_00143 type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation; SPTR: Cytochrome c oxidase accessory protein CcoG; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG.
 
  
 0.881
ADX67538.1
Integral membrane protein; COGs: COG2836 conserved hypothetical protein; KEGG: fba:FIC_00141 heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis CycZ-like domain, possible membrane copper tolerance protein; SPTR: Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein.
 
     0.870
ADX67539.1
KEGG: fba:FIC_00142 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: FixH.
 
   
 0.818
ADX67546.1
Transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808; KEGG: fba:FIC_00149 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding domain; SPTR: Global nitrogen regulator NtcA; PFAM: Cyclic nucleotide-binding domain.
 
     0.729
ADX68061.1
COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638:IPR007197:IPR010723:IPR004558; KEGG: fbc:FB2170_03835 coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Possible coproporphyrinogen dehydrogenase; TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.715
ADX67075.1
InterPro IPR006121; KEGG: fjo:Fjoh_1452 heavy metal transport/detoxification protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Cation-transporting ATPase; PFAM: Heavy-metal-associated domain.
  
 
 0.693
ADX67544.1
InterPro IPR004714; KEGG: fps:FP1154 cytochrome cbb3 oxidase maturation protein CcoS; SPTR: Putative uncharacterized protein; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type.
  
  
 0.654
ADX67542.1
KEGG: fba:FIC_00145 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cbb3-type cytochrome oxidase component FixQ.
       0.551
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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