STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX67818.1KEGG: fba:FIC_00194 hypothetical protein; SPTR: Putative uncharacterized protein. (272 aa)    
Predicted Functional Partners:
ADX67817.1
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
    0.831
ADX67815.1
InterPro IPR005632; KEGG: cpi:Cpin_1053 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein (OmpH-like); PFAM: Outer membrane protein (OmpH-like).
 
 
 
 0.818
ADX68477.1
Putative protein-translocating porin PorT; KEGG: fba:FIC_00515 PorT protein; SPTR: PorT protein; (TC 1.B.44.1.1.
 
     0.789
ADX68463.1
KEGG: fba:FIC_01588 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.762
ADX67816.1
COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474:IPR010827:IPR000184; KEGG: fba:FIC_00196 outer membrane protein assembly factor YaeT precursor; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Outer membrane protein assembly factor YaeT; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
   
   0.761
ADX68443.1
KEGG: fba:FIC_00009 TPR domain protein; SPTR: TPR domain protein.
  
     0.759
ADX66935.1
Gliding motility-associated lipoprotein GldJ; InterPro IPR019865:IPR005532; KEGG: fba:FIC_00569 GldJ; PFAM: Sulphatase-modifying factor; SPTR: Gliding motility-associated lipoprotein GldJ; TIGRFAM: Gliding motility-associated lipoprotein GldJ; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldJ.
 
     0.757
ADX67167.1
Putative membrane protein; InterPro IPR019861; KEGG: fba:FIC_00313 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.756
ADX67268.1
KEGG: fba:FIC_00490 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM.
  
     0.750
ADX67168.1
KEGG: fba:FIC_01155 secreted protein containing hyalin domain; SPTR: CUB domain-containing protein.
  
    0.749
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.