STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX68107.1KEGG: kol:Kole_0467 hypothetical protein; SPTR: Putative uncharacterized protein. (63 aa)    
Predicted Functional Partners:
ADX68108.1
KEGG: fba:FIC_00716 TPR/glycosyl transferase domain protein; SPTR: Group 1 glycosyl transferase.
       0.554
ADX68109.1
Protein of unknown function, membrane YfhO; InterPro IPR018580; KEGG: fba:FIC_00715 hypothetical protein; PFAM: Uncharacterised protein family YfhO; SPTR: Putative uncharacterized protein; PFAM: Bacterial membrane protein YfhO.
       0.554
ADX68110.1
KEGG: fba:FIC_00714 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.554
ADX68111.1
KEGG: fba:FIC_00713 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.554
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.