STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX68292.1Domain of unknown function DUF1731; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR010099:IPR001509:IPR013549; KEGG: fba:FIC_01530 hypothetical protein; PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777. (298 aa)    
Predicted Functional Partners:
ADX68631.1
Lipocalin family protein; COGs: COG3040 Bacterial lipocalin; InterPro IPR013208; KEGG: ddi:DDB_G0269882 hypothetical protein; PFAM: Lipocalin-like; SPTR: Putative uncharacterized protein; PFAM: Lipocalin-like domain; Belongs to the calycin superfamily. Lipocalin family.
      0.862
ADX67129.1
GCN5-related N-acetyltransferase; COGs: COG2388 acetyltransferase; InterPro IPR000182; KEGG: fjo:Fjoh_4180 acetyltransferase-like protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase-like protein; PFAM: Acetyltransferase (GNAT) family.
  
    0.656
ADX68291.1
Ion transport protein; InterPro IPR005821; KEGG: cvi:CV_3562 ion transporter; PFAM: Ion transport; SPTR: Fructose-6-phosphate aldolase 2; PFAM: Ion transport protein.
  
    0.564
ADX67375.1
KEGG: cpi:Cpin_6526 hypothetical protein; SPTR: Putative uncharacterized protein.
   
    0.536
ADX67846.1
CsbD family protein; InterPro IPR008462; KEGG: zpr:ZPR_3085 CsbD-like protein; PFAM: CsbD-like; SPTR: Putative uncharacterized protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
    0.529
ADX67857.1
KEGG: fba:FIC_00222 hypothetical protein; SPTR: Putative uncharacterized protein.
   
    0.491
ADX68552.1
Iron (metal) dependent repressor, DtxR family; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR022687:IPR001367:IPR022689; KEGG: fba:FIC_02393 Mn-dependent transcriptional regulator MntR; PFAM: Iron dependent repressor; Iron dependent repressor, N-terminal; SMART: Iron dependent repressor, diptheria toxin type; SPTR: Iron repressor protein; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.
   
    0.491
zupT
Zinc transporter zupT; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
  
    0.434
ADX68663.1
Zinc/iron permease; InterPro IPR003689; KEGG: fbc:FB2170_09091 hypothetical protein; PFAM: Zinc/iron permease; SPTR: Zinc uptake transporter; PFAM: ZIP Zinc transporter.
  
    0.434
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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