STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX68306.1Protein of unknown function DUF164; COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: cat:CA2559_07836 hypothetical protein; PFAM: Protein of unknown function DUF164; SPTR: Putative uncharacterized protein; PFAM: Putative zinc ribbon domain. (260 aa)    
Predicted Functional Partners:
ADX68305.1
NGG1p interacting factor 3 protein, NIF3; COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: gfo:GFO_2707 hypothetical protein; PFAM: NGG1p interacting factor 3, NIF3; SPTR: Protein containing DUF34; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
 
  
 0.941
ADX68125.1
KEGG: fba:FIC_00179 DnaK suppressor protein, putative; SPTR: Glucose-6-phosphate isomerase; PFAM: Prokaryotic dksA/traR C4-type zinc finger.
  
     0.733
ADX67816.1
COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474:IPR010827:IPR000184; KEGG: fba:FIC_00196 outer membrane protein assembly factor YaeT precursor; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Outer membrane protein assembly factor YaeT; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
  
     0.725
ADX68685.1
KEGG: gfo:GFO_0649 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6.
 
     0.718
ADX67276.1
KEGG: fba:FIC_00078 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.690
ADX68146.1
Hypothetical protein; COGs: COG1452 Organic solvent tolerance protein OstA; KEGG: fba:FIC_02237 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.671
ADX67696.1
KEGG: fba:FIC_00153 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.662
ADX68118.1
KEGG: fba:FIC_01301 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2723).
  
     0.647
ADX68770.1
KEGG: fba:FIC_00752 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.647
ADX68379.1
KEGG: cat:CA2559_09096 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2795).
  
     0.645
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.