STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX68439.1InterPro IPR003088; KEGG: fba:FIC_02414 hypothetical protein; PFAM: Cytochrome c, class I; SPTR: Cytochrome c family protein; PFAM: Cytochrome c. (222 aa)    
Predicted Functional Partners:
ADX67543.1
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883:IPR003468:IPR004677; KEGG: fba:FIC_00146 cytochrome c oxidase subunit CcoN; PFAM: Cytochrome c oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome c oxidase; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome c oxidase, monohaem subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; Belongs [...]
 
 
 0.999
ADX68436.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311:IPR001450; KEGG: fba:FIC_02417 molybdopterin oxidoreductase, iron-sulfur binding subunit; PFAM: 4Fe-4S binding domain; SPTR: Formate-dependent nitrite reductase [Fe-S] protein NrfC.
 
 
 0.999
ADX68437.1
COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: fba:FIC_02416 molybdopterin oxidoreductase; PFAM: Polysulphide reductase, NrfD; SPTR: Molybdopterin oxidoreductase; PFAM: Polysulphide reductase, NrfD.
 
 
 0.999
ADX68440.1
KEGG: fba:FIC_02413 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.999
ADX68438.1
KEGG: fba:FIC_02415 ABC-type Fe3+ transport system protein; molybdenum transport protein, putative; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3341).
 
   0.992
ADX68435.1
InterPro IPR003088; KEGG: fba:FIC_02418 molybdopterin oxidoreductase subunit, predicted; chaperone protein HtpG; PFAM: Cytochrome c, class I; SPTR: Molybdopterin oxidoreductase subunit, predicted; chaperone protein HtpG; PFAM: Class III cytochrome C family; Cytochrome c.
 
 
 
 0.963
ADX67542.1
KEGG: fba:FIC_00145 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cbb3-type cytochrome oxidase component FixQ.
  
 
 0.679
ADX67539.1
KEGG: fba:FIC_00142 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: FixH.
 
 
 0.640
ADX67188.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001041:IPR001450; KEGG: fps:FP0095 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; PFAM: 4Fe-4S binding domain; Ferredoxin; SPTR: Succinate dehydrogenase, iron-sulfur protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
   
  
 0.614
ADX68765.1
Cholesterol oxidase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076; KEGG: sen:SACE_6417 cholesterol oxidase; PFAM: FAD dependent oxidoreductase; PRIAM: Cholesterol oxidase; SPTR: Cholesterol oxidase; PFAM: GMC oxidoreductase.
  
 
 0.544
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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