STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX68515.1Protein of unknown function DUF541; COGs: COG2859 conserved hypothetical protein; InterPro IPR007497; KEGG: fba:FIC_02304 hypothetical protein; PFAM: Protein of unknown function DUF541; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF541). (244 aa)    
Predicted Functional Partners:
ADX68516.1
COGs: COG1564 Thiamine pyrophosphokinase; InterPro IPR006282:IPR007371; KEGG: zpr:ZPR_2002 thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, catalytic domain; SPTR: Thiamine diphosphokinase; TIGRFAM: Thiamin pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase.
       0.625
ADX68517.1
ATP/cobalamin adenosyltransferase; COGs: COG2096 conserved hypothetical protein; InterPro IPR017858:IPR002779; KEGG: zpr:ZPR_1084 cobalamin adenosyltransferase family protein; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase.
       0.625
ADX68518.1
InterPro IPR011701; KEGG: phe:Phep_1458 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator family transporter; PFAM: Major Facilitator Superfamily.
       0.555
ADX68708.1
Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fba:FIC_01172 aminopeptidase, putative; PFAM: Peptidase M28; SPTR: M28 family peptidase; PFAM: Peptidase family M28.
  
     0.414
ADX68519.1
KEGG: fps:FP0565 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.405
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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