STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX68594.1KEGG: fjo:Fjoh_1911 hypothetical protein; SPTR: Putative uncharacterized protein. (108 aa)    
Predicted Functional Partners:
ADX68593.1
1-aminocyclopropane-1-carboxylate deaminase-like protein; COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; KEGG: fjo:Fjoh_1912 1-aminocyclopropane-1-carboxylate deaminase-like protein; SPTR: Putative D-cysteine desulfhydrase (DcyD); PFAM: Pyridoxal-phosphate dependent enzyme.
       0.828
ADX68592.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; COGs: COG1705 Muramidase (flagellum-specific); InterPro IPR002901:IPR018392:IPR013338:IPR002482; KEGG: fba:FIC_02084 hemagglutinin; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Peptidoglycan-binding lysin domain; SMART: Lysozyme domain, subfamily 2; Peptidoglycan-binding Lysin subgroup; SPTR: Hemagglutinin; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; LysM domain.
       0.793
ADX67772.1
Lipolytic protein G-D-S-L family; InterPro IPR001087; KEGG: fbc:FB2170_02760 hypothetical protein; PFAM: Lipase, GDSL; SPTR: Putative uncharacterized protein.
  
     0.658
ADX68514.1
KEGG: zpr:ZPR_0790 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.649
hemL
COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; HAMAP: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; InterPro IPR005814:IPR004639; KEGG: fba:FIC_02083 glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Glutamate-1-semialdehyde 2,1-aminomutase; SPTR: Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase.
       0.646
ADX68595.1
Colicin V production protein; InterPro IPR003825; KEGG: cat:CA2559_02100 hypothetical protein; PFAM: Colicin V production, CvpA; SPTR: Putative uncharacterized protein; PFAM: Colicin V production protein.
       0.642
ADX68596.1
COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: fba:FIC_00763 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; PFAM: Aminotransferase class-V.
       0.642
ADX67491.1
TonB-dependent receptor plug; COGs: COG4774 Outer membrane receptor for monomeric catechols; InterPro IPR012910:IPR000531; KEGG: bfs:BF0018 putative iron transport receptor protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Ferrichrome-iron receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
     0.560
ADX67125.1
KEGG: rbi:RB2501_15349 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF937).
  
     0.533
ADX68597.1
KEGG: csc:Csac_0632 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.505
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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