STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX68729.1Peptidyl-dipeptidase Dcp; COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: fba:FIC_02176 peptidyl-dipeptidase I; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; PRIAM: Peptidyl-dipeptidase Dcp; SPTR: Peptidyl-dipeptidase Dcp2; PFAM: Peptidase family M3. (716 aa)    
Predicted Functional Partners:
ADX68730.1
Hypothetical protein; KEGG: zpr:ZPR_1207 patatin-like phospholipase; SPTR: Putative uncharacterized protein.
       0.492
ADX68728.1
COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006660; KEGG: zpr:ZPR_2332 arsenate reductase; PFAM: Arsenate reductase-like; SPTR: Arsenate reductase; PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin); Belongs to the ArsC family.
       0.459
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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