STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX68735.1InterPro IPR002591; KEGG: phe:Phep_1357 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: Ca2+ ATPase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase. (547 aa)    
Predicted Functional Partners:
ADX68736.1
COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: sbn:Sbal195_1192 rhodanese domain-containing protein; PFAM: Rhodanese-like; PRIAM: 3-mercaptopyruvate sulfurtransferase; SMART: Rhodanese-like; SPTR: Rhodanese domain protein; PFAM: Rhodanese-like domain.
       0.623
ADX68734.1
Beta-Ala-His dipeptidase; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: coc:Coch_1195 peptidase dimerisation domain protein; PFAM: Peptidase M20, dimerisation; Peptidase M20; PRIAM: Beta-Ala-His dipeptidase; SPTR: Peptidase dimerisation domain protein; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain.
       0.477
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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