STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX68744.1Branched-chain amino acid transport system II carrier protein; COGs: COG1114 Branched-chain amino acid permease; InterPro IPR004685; KEGG: coc:Coch_1310 branched-chain amino acid transport system II carrier protein; PFAM: Branched-chain amino acid transport system II carrier protein; SPTR: LIVCS family branched chain amino acid:cation symporter; TIGRFAM: Branched-chain amino acid transport system II carrier protein; PFAM: Branched-chain amino acid transport protein; TIGRFAM: branched-chain amino acid uptake carrier. (435 aa)    
Predicted Functional Partners:
ADX68742.1
KEGG: bvu:BVU_2723 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.601
ADX68743.1
Heat shock protein DnaJ domain protein; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623:IPR002939; KEGG: bfs:BF3207 putative chaperone; PFAM: Heat shock protein DnaJ, N-terminal; Chaperone DnaJ, C-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Putative chaperone; PFAM: DnaJ domain; DnaJ C terminal region.
       0.601
ADX67745.1
Amino acid permease-associated region protein; COGs: COG1113 Gamma-aminobutyrate permease and related permease; InterPro IPR004841; KEGG: fjo:Fjoh_3147 amino acid permease-associated region; PFAM: Amino acid permease domain; SPTR: APC family proline transporter ProY; PFAM: Amino acid permease.
 
  
 0.472
ADX68745.1
COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130; KEGG: phe:Phep_3143 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD.
       0.465
ADX68741.1
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.404
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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