STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MINDY1Ubiquitin carboxyl-terminal hydrolase MINDY-1-like. (445 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.850
LOC113426803
Ubiquitin.
    
   0.850
RPS27A
Ribosomal protein S27a.
    
   0.761
SETD3
SET domain containing 3, actin histidine methyltransferase.
    
 0.738
MMUT
methylmalonyl-CoA mutase.
    
 0.738
SETD4
SET domain containing 4.
    
 0.738
ENSNSUP00000004819
annotation not available
    
   0.701
RNF126
Ring finger protein 126.
    
  0.646
RNF115
Ring finger protein 115.
    
  0.622
PJA2
Praja ring finger ubiquitin ligase 2.
    
 0.616
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.