Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113416142Histone H2A type 2-C-like. (129 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.911
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.900
RPS27A
Ribosomal protein S27a.
   
 0.891
LOC113416145
Histone H2B 5.
  
 0.876
LOC113422786
Histone H2B 1/2/3/4/6.
  
 0.876
LOC113427173
Histone H2B 8-like.
  
 0.875
LOC113427172
Histone H2B 8-like.
  
 0.875
LOC113421000
Histone H2B 8-like.
  
 0.875
ENSNSUP00000028401
annotation not available
    
 0.844
ENSNSUP00000015814
annotation not available
  
 0.842
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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