STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRA1Transmembrane protein adipocyte associated 1. (381 aa)    
Predicted Functional Partners:
TRPA1
Transient receptor potential cation channel subfamily A member 1.
      
 0.565
RSPRY1
Ring finger and SPRY domain containing 1.
      
 0.563
MPHOSPH8
M-phase phosphoprotein 8.
      
 0.528
ENSNSUP00000018403
annotation not available
      
 0.528
RCBTB1
RCC1 and BTB domain containing protein 1.
   
  
 0.525
GTF3C1
General transcription factor IIIC subunit 1.
      
 0.497
NUDT13
Nudix hydrolase 13.
      
 0.475
ZC3H15
Zinc finger CCCH-type containing 15.
      
 0.461
ENSNSUP00000028474
annotation not available
      
 0.461
CCDC106
Coiled-coil domain containing 106.
      
 0.457
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.