STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNSUP00000001252annotation not available (86 aa)    
Predicted Functional Partners:
TRIM23
Tripartite motif containing 23.
   
 0.687
ARL15
ADP ribosylation factor like GTPase 15.
    
 0.674
ENSNSUP00000009731
annotation not available
    
 0.674
ARF6
ADP ribosylation factor 6.
    
 0.674
LOC113425824
ADP-ribosylation factor 6-like.
    
 0.674
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
     
 0.663
IQSEC2
IQ motif and Sec7 domain ArfGEF 2.
    
 0.582
IQSEC3
IQ motif and Sec7 domain ArfGEF 3.
    
 0.582
IQSEC1
IQ motif and Sec7 domain ArfGEF 1.
    
 0.582
LOC113427200
ADP-ribosylation factor 1.
    
 0.540
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.