Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RAB38RAB38, member RAS oncogene family. (141 aa)    
Predicted Functional Partners:
CHM
CHM Rab escort protein.
    
 0.853
ANKRD27
Ankyrin repeat domain 27.
    
 
 0.846
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.840
GAK
Cyclin G associated kinase.
    
 
 0.832
HPS4
HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.
    
 0.756
TYRP1
Tyrosinase related protein 1.
    
 
 0.655
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
    
 
 0.644
PTAR1
Protein prenyltransferase alpha subunit repeat containing 1.
    
 0.639
HPS1
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.
    
 0.634
GDI2
Rab GDP dissociation inhibitor beta-like.
    
 0.614
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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