STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113430292Nexilin-like. (135 aa)    
Predicted Functional Partners:
P2RY11
Purinergic receptor P2Y11.
   
 
 0.966
GTPBP4
GTP binding protein 4.
   
 
 0.954
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.944
ENSNSUP00000009801
annotation not available
   
 
 0.939
RPF1
Ribosome production factor 1 homolog.
   
 
 0.936
MAK16
MAK16 homolog.
   
   0.927
RRP15
Ribosomal RNA processing 15 homolog.
   
 
 0.924
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 
 0.913
RSL24D1
Ribosomal L24 domain containing 1.
   
 
 0.906
RSL1D1
Ribosomal L1 domain containing 1.
   
 
 0.903
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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