STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB18RAB18, member RAS oncogene family. (205 aa)    
Predicted Functional Partners:
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
    
 0.833
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
     
 0.804
GDI2
Rab GDP dissociation inhibitor beta-like.
   
 0.766
GDI1
GDP dissociation inhibitor 1.
   
 0.766
CHM
CHM Rab escort protein.
     
 0.692
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.685
PTAR1
Protein prenyltransferase alpha subunit repeat containing 1.
    
 0.675
RAB36
RAB36, member RAS oncogene family.
  
 
0.665
ACTR10
Actin related protein 10.
   
 
 0.663
DCTN6
Dynactin subunit 6.
     
 0.661
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.