STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC4Armadillo repeat containing 4. (404 aa)    
Predicted Functional Partners:
TTC25
Tetratricopeptide repeat domain 25.
  
 0.909
EFCAB1
EF-hand calcium binding domain 1.
  
 0.892
CCDC63
Coiled-coil domain containing 63.
   
 0.887
CCDC151
Coiled-coil domain containing 151.
    
 0.884
WDR90
WD repeat domain 90.
    
   0.832
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.826
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.785
TEKT2
Tektin 2.
   
 
 0.768
EFHC1
EF-hand domain containing 1.
   
 
 0.751
EFHC2
EF-hand domain containing 2.
   
 
 0.751
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.