STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPHPeripherin. (453 aa)    
Predicted Functional Partners:
NEFL
Neurofilament light.
    
 
0.807
INA
Internexin neuronal intermediate filament protein alpha.
  
 
 
0.777
NEFH
Neurofilament heavy.
    
 
0.769
ENSNSUP00000005598
annotation not available
    
  0.709
SYNC
Syncoilin, intermediate filament protein.
    
 
0.641
ENSNSUP00000001974
annotation not available
    
  0.564
MBLAC1-2
Metallo-beta-lactamase domain containing 1.
    
  0.564
FAM107B
Family with sequence similarity 107 member B.
    
  0.564
LOC113417265
Uncharacterized LOC113417265.
    
  0.564
ENSNSUP00000004978
annotation not available
    
  0.564
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.