STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113411610E3 SUMO-protein ligase RanBP2-like. (1676 aa)    
Predicted Functional Partners:
RANGAP1
Ran GTPase activating protein 1.
   
 0.929
SUMO1
Small ubiquitin like modifier 1.
   
 0.900
NUP88
Nucleoporin 88.
    
 0.871
NUP107
Nucleoporin 107.
   
 0.863
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.857
NUP155
Nucleoporin 155.
   
 0.827
NUP93
Nucleoporin 93.
   
 0.823
SEH1L
SEH1 like nucleoporin.
    
 0.812
NUP153
Nucleoporin 153.
   
 0.807
ENSNSUP00000026821
annotation not available
    
 0.805
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.