STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNSUP00000001689annotation not available (225 aa)    
Predicted Functional Partners:
LOC113426803
Ubiquitin.
    
  0.709
ENSNSUP00000012434
annotation not available
   
 0.705
RPS27A
Ribosomal protein S27a.
    
  0.705
RO60
Ro60, Y RNA binding protein.
    
 0.588
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.580
DDX41
DEAD-box helicase 41.
    
 0.579
DDX58
DExD/H-box helicase 58.
    
  0.571
UBE2L3
Ubiquitin conjugating enzyme E2 L3.
    
  0.569
LOC113422655
Ubiquitin-conjugating enzyme E2 L3-like.
    
  0.569
ENSNSUP00000004819
annotation not available
    
  0.557
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.