STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSNAXTranslin associated factor X. (288 aa)    
Predicted Functional Partners:
TSN
Translin.
   
0.999
AGO2
Argonaute RISC catalytic component 2.
    
 0.963
DICER1
Dicer 1, ribonuclease III.
     
 0.959
RPP30
Ribonuclease P/MRP subunit p30.
  
 
  0.934
POP5
POP5 homolog, ribonuclease P/MRP subunit.
    
 0.931
PRORP
Protein only RNase P catalytic subunit.
   
 
  0.927
TRMT10C
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 
  0.923
AGO3
Argonaute RISC catalytic component 3.
    
 0.843
AGO1
Argonaute RISC component 1.
    
 0.843
AGO4
Argonaute RISC component 4.
    
 0.843
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.