STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113430628Protein POLR1D-like. (102 aa)    
Predicted Functional Partners:
APAF1
Apoptotic peptidase activating factor 1.
   
 0.863
ARID4B
AT-rich interaction domain 4B.
    
 0.849
ARID4A
AT-rich interaction domain 4A.
    
 0.849
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.809
FANCM
FA complementation group M.
    
 0.793
SMN1
Survival of motor neuron 1, telomeric.
   
 0.791
POLD1
DNA polymerase delta 1, catalytic subunit.
   
 0.787
MUS81
MUS81 structure-specific endonuclease subunit.
    
 0.786
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
    
 0.762
SNRPE
Small nuclear ribonucleoprotein polypeptide E.
   
 0.761
Your Current Organism:
Notechis scutatus
NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.