ENSNSUP00000002012 protein (Notechis scutatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSNSUP00000002012

annotation not available (65 aa)

Predicted Functional Partners:

MYO6

0.912

APPL1

0.896

APPL2

0.895

NTRK2

0.823

NRP1

0.790

SH3BP4

0.779

BTBD19

0.766

LOC113427643

0.761

TGFBR3

0.692

NTRK3

0.691

Your Current Organism:

Notechis scutatus

NCBI taxonomy Id: 8663
Other names: N. scutatus, Naja (Hamadryas) scutata, ZMB 2815, common tiger snake, mainland tiger snake

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APPL1	APPL2	ENSNSUP00000028379	ENSNSUP00000018075	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	0.985
APPL1	ENSNSUP00000002012	ENSNSUP00000028379	ENSNSUP00000002012	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	annotation not available	0.896
APPL2	APPL1	ENSNSUP00000018075	ENSNSUP00000028379	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	0.985
APPL2	ENSNSUP00000002012	ENSNSUP00000018075	ENSNSUP00000002012	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	annotation not available	0.895
BTBD19	ENSNSUP00000002012	ENSNSUP00000021747	ENSNSUP00000002012	BTB domain containing 19.	annotation not available	0.766
ENSNSUP00000002012	APPL1	ENSNSUP00000002012	ENSNSUP00000028379	annotation not available	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	0.896
ENSNSUP00000002012	APPL2	ENSNSUP00000002012	ENSNSUP00000018075	annotation not available	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.	0.895
ENSNSUP00000002012	BTBD19	ENSNSUP00000002012	ENSNSUP00000021747	annotation not available	BTB domain containing 19.	0.766
ENSNSUP00000002012	LOC113427643	ENSNSUP00000002012	ENSNSUP00000022803	annotation not available	Regulator of G-protein signaling 19-like.	0.761
ENSNSUP00000002012	MYO6	ENSNSUP00000002012	ENSNSUP00000006762	annotation not available	Myosin VI.	0.912
ENSNSUP00000002012	NRP1	ENSNSUP00000002012	ENSNSUP00000003465	annotation not available	Neuropilin 1.	0.790
ENSNSUP00000002012	NTRK2	ENSNSUP00000002012	ENSNSUP00000019791	annotation not available	Neurotrophic receptor tyrosine kinase 2.	0.823
ENSNSUP00000002012	NTRK3	ENSNSUP00000002012	ENSNSUP00000014589	annotation not available	Neurotrophic receptor tyrosine kinase 3.	0.691
ENSNSUP00000002012	SH3BP4	ENSNSUP00000002012	ENSNSUP00000017341	annotation not available	SH3 domain binding protein 4.	0.779
ENSNSUP00000002012	TGFBR3	ENSNSUP00000002012	ENSNSUP00000028032	annotation not available	Transforming growth factor beta receptor 3.	0.692
LOC113427643	ENSNSUP00000002012	ENSNSUP00000022803	ENSNSUP00000002012	Regulator of G-protein signaling 19-like.	annotation not available	0.761
LOC113427643	MYO6	ENSNSUP00000022803	ENSNSUP00000006762	Regulator of G-protein signaling 19-like.	Myosin VI.	0.423
MYO6	ENSNSUP00000002012	ENSNSUP00000006762	ENSNSUP00000002012	Myosin VI.	annotation not available	0.912
MYO6	LOC113427643	ENSNSUP00000006762	ENSNSUP00000022803	Myosin VI.	Regulator of G-protein signaling 19-like.	0.423
MYO6	NTRK2	ENSNSUP00000006762	ENSNSUP00000019791	Myosin VI.	Neurotrophic receptor tyrosine kinase 2.	0.730